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Yttrium in PDB 1lva: Crystal Structure of A C-Terminal Fragment of Moorella Thermoacetica Elongation Factor Selb

Protein crystallography data

The structure of Crystal Structure of A C-Terminal Fragment of Moorella Thermoacetica Elongation Factor Selb, PDB code: 1lva was solved by M.Selmer, X.-D.Su, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 19.24 / 2.12
Space group P 21 21 21
Cell size a, b, c (Å), α, β, γ (°) 37.841, 67.006, 105.357, 90.00, 90.00, 90.00
R / Rfree (%) 21.5 / 25.8

Yttrium Binding Sites:

The binding sites of Yttrium atom in the Crystal Structure of A C-Terminal Fragment of Moorella Thermoacetica Elongation Factor Selb (pdb code 1lva). This binding sites where shown within 5.0 Angstroms radius around Yttrium atom.
In total 2 binding sites of Yttrium where determined in the Crystal Structure of A C-Terminal Fragment of Moorella Thermoacetica Elongation Factor Selb, PDB code: 1lva:
Jump to Yttrium binding site number: 1; 2;

Yttrium binding site 1 out of 2 in 1lva

Go back to Yttrium Binding Sites List in 1lva
Yttrium binding site 1 out of 2 in the Crystal Structure of A C-Terminal Fragment of Moorella Thermoacetica Elongation Factor Selb


Mono view


Stereo pair view

A full contact list of Yttrium with other atoms in the Y binding site number 1 of Crystal Structure of A C-Terminal Fragment of Moorella Thermoacetica Elongation Factor Selb within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Y743

b:40.0
occ:0.96
O A:HOH685 2.1 34.2 1.0
OE1 A:GLU487 2.3 39.9 1.0
CD A:GLU487 3.1 39.5 1.0
OE2 A:GLU487 3.2 41.1 1.0
O A:ARG427 4.3 41.6 1.0
O A:HOH689 4.4 30.7 1.0
CG A:GLU487 4.5 36.6 1.0
CB A:GLU487 4.9 31.6 1.0

Yttrium binding site 2 out of 2 in 1lva

Go back to Yttrium Binding Sites List in 1lva
Yttrium binding site 2 out of 2 in the Crystal Structure of A C-Terminal Fragment of Moorella Thermoacetica Elongation Factor Selb


Mono view


Stereo pair view

A full contact list of Yttrium with other atoms in the Y binding site number 2 of Crystal Structure of A C-Terminal Fragment of Moorella Thermoacetica Elongation Factor Selb within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Y744

b:35.3
occ:0.76
O A:HOH732 2.2 47.2 1.0
O A:HOH729 2.2 35.1 1.0
OD1 A:ASP627 2.2 40.0 1.0
O A:HOH738 2.4 45.3 1.0
OD2 A:ASP627 2.8 37.0 1.0
CG A:ASP627 2.8 36.3 1.0
CB A:ASP627 4.3 34.7 1.0
O A:HOH723 4.6 35.1 1.0
O A:GLY626 4.8 38.4 1.0
C A:GLY626 4.8 36.8 1.0
N A:ASP627 4.8 35.5 1.0
CA A:ASP627 4.9 34.2 1.0

Reference:

M.Selmer, X.D.Su. Crystal Structure of An Mrna-Binding Fragment of Moorella Thermoacetica Elongation Factor Selb. Embo J. V. 21 4145 2002.
ISSN: ISSN 0261-4189
PubMed: 12145214
DOI: 10.1093/EMBOJ/CDF408
Page generated: Wed Dec 16 02:40:43 2020

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