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Yttrium in PDB 6the: Crystal Structure of Core Domain of Four-Domain Heme-Cupredoxin-Cu Nitrite Reductase From Bradyrhizobium Sp. Ors 375
Enzymatic activity of Crystal Structure of Core Domain of Four-Domain Heme-Cupredoxin-Cu Nitrite Reductase From Bradyrhizobium Sp. Ors 375
All present enzymatic activity of Crystal Structure of Core Domain of Four-Domain Heme-Cupredoxin-Cu Nitrite Reductase From Bradyrhizobium Sp. Ors 375:
1.7.2.1;
1.7.2.1;
Protein crystallography data
The structure of Crystal Structure of Core Domain of Four-Domain Heme-Cupredoxin-Cu Nitrite Reductase From Bradyrhizobium Sp. Ors 375, PDB code: 6the
was solved by
D.Sasaki,
T.F.Watanabe,
R.R.Eady,
R.C.Garratt,
S.V.Antonyuk,
S.S.Hasnain,
with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:
| Resolution Low / High (Å) | 39.57 / 2.87 |
| Space group | I 2 3 |
| Cell size a, b, c (Å), α, β, γ (°) | 125.141, 125.141, 125.141, 90.00, 90.00, 90.00 |
| R / Rfree (%) | 22.5 / 23.4 |
Other elements in 6the:
The structure of Crystal Structure of Core Domain of Four-Domain Heme-Cupredoxin-Cu Nitrite Reductase From Bradyrhizobium Sp. Ors 375 also contains other interesting chemical elements:
| Ytterbium | (Yb) | 3 atoms |
| Erbium | (Er) | 4 atoms |
| Terbium | (Tb) | 1 atom |
| Chlorine | (Cl) | 1 atom |
| Copper | (Cu) | 2 atoms |
Yttrium Binding Sites:
The binding sites of Yttrium atom in the Crystal Structure of Core Domain of Four-Domain Heme-Cupredoxin-Cu Nitrite Reductase From Bradyrhizobium Sp. Ors 375
(pdb code 6the). This binding sites where shown within
5.0 Angstroms radius around Yttrium atom.
In total 2 binding sites of Yttrium where determined in the Crystal Structure of Core Domain of Four-Domain Heme-Cupredoxin-Cu Nitrite Reductase From Bradyrhizobium Sp. Ors 375, PDB code: 6the:
Jump to Yttrium binding site number: 1; 2;
In total 2 binding sites of Yttrium where determined in the Crystal Structure of Core Domain of Four-Domain Heme-Cupredoxin-Cu Nitrite Reductase From Bradyrhizobium Sp. Ors 375, PDB code: 6the:
Jump to Yttrium binding site number: 1; 2;
Yttrium binding site 1 out of 2 in 6the
Go back to
Yttrium Binding Sites List in 6the
Yttrium binding site 1 out
of 2 in the Crystal Structure of Core Domain of Four-Domain Heme-Cupredoxin-Cu Nitrite Reductase From Bradyrhizobium Sp. Ors 375
Mono view
Stereo pair view
Mono view
Stereo pair view
A full contact list of Yttrium with other atoms in the Y binding
site number 1 of Crystal Structure of Core Domain of Four-Domain Heme-Cupredoxin-Cu Nitrite Reductase From Bradyrhizobium Sp. Ors 375 within 5.0Å range:
|
Yttrium binding site 2 out of 2 in 6the
Go back to
Yttrium Binding Sites List in 6the
Yttrium binding site 2 out
of 2 in the Crystal Structure of Core Domain of Four-Domain Heme-Cupredoxin-Cu Nitrite Reductase From Bradyrhizobium Sp. Ors 375
Mono view
Stereo pair view
Mono view
Stereo pair view
A full contact list of Yttrium with other atoms in the Y binding
site number 2 of Crystal Structure of Core Domain of Four-Domain Heme-Cupredoxin-Cu Nitrite Reductase From Bradyrhizobium Sp. Ors 375 within 5.0Å range:
|
Reference:
D.Sasaki,
T.F.Watanabe,
R.R.Eady,
R.C.Garratt,
S.V.Antonyuk,
S.S.Hasnain.
Reverse Protein Engineering of A Novel 4-Domain Copper Nitrite Reductase Reveals Functional Regulation By Protein-Protein Interaction. Febs J. 2020.
ISSN: ISSN 1742-464X
PubMed: 32255260
DOI: 10.1111/FEBS.15324
Page generated: Wed Dec 16 02:41:19 2020
ISSN: ISSN 1742-464X
PubMed: 32255260
DOI: 10.1111/FEBS.15324
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